BioModels Database logo

BioModels Database

spacer

Uhlén2017 - TCGA-HR-A5NC-01A - Skin Cuteneous Melanoma (female, 91 years)


Model information
Identifier: MODEL1707115576
Original model: MODEL1707115576.xml.origin
Publication: 10.1126/science.aan2507
Submitter: Adil Mardinoglu
Age at diagnosis: 91
Gender: female
Disease: Skin Cuteneous Melanoma
Primary disease site: skin
Format: SBML L2V3
Submission: 17 Aug 2017 19:01:51 UTC
Last modified: 17 Aug 2017 19:01:43 UTC
Published: 17 Aug 2017 19:01:51 UTC
Annotations
is BioModels MODEL1707115576
isDerivedFrom BioModels MODEL1402200003
hasTaxon Taxonomy Homo sapiens
isDerivedFrom Genomic Data Commons Data Portal 2c8d436c-4edb-4083-b23f-9a33307d5bb2
hasProperty Experimental Factor Ontology Skin Cuteneous Melanoma
hasProperty PATO female
Notes

This is a whole genome metabolism model of a female patient diagnosed at the age of 91 years with Skin Cuteneous Melanoma affecting the patient's skin.

This model was automatically generated by tINIT (Agren, R., et al. (2014). Identification of anticancer drugs for hepatocellular carcinoma through personalized genome-scale metabolic modeling. Mol Syst Biol; 10(3), 721.) using information coming from the sample TCGA-HR-A5NC-01A from GDC Portal (Initial release 1.0, accessed via GDC API) and, where relevant, augmented with metabolic pathway information extracted from Human Metabolic Atlas.

This model has been produced by Human Pathology Atlas project ( Uhlen, M., et al.; A pathology atlas of the human cancer transcriptome. Science.) and is currently hosted on BioModels Database and identified by MODEL1707115576.

To cite BioModels, please use: V Chelliah et al; BioModels: ten-year anniversary. Nucleic Acids Res 2015; 43 (D1): D542-D548.

To the extent possible under law, all copyright and related or neighbouring rights to this encoded model have been dedicated to the public domain worldwide. Please refer to CC0 Public Domain Dedication for more information.

spacer
spacer