Application closed for "Model of the year" Competition 2024. Evaluation under progress!

BioModels is a repository of mathematical models of biological and biomedical systems. It hosts a vast selection of existing literature-based physiologically and pharmaceutically relevant mechanistic models in standard formats. Our mission is to provide the systems modelling community with reproducible, high-quality, freely-accessible models published in the scientific literature. More information about using BioModels such as model submission, update, publication, or reviewers access can be found in the FAQ.

Highlight Features

Manually Curated

1,073 models

Non-curated

1,537 models

Auto generated

833 models

GO Chart

1,132 classes
1,073 models
1,537 models
833 models
1,132 classes

Model of The Month

May, 2024

Deciphering cell fate: a mathematical model of life and death decisions in erythroid progenitors

Every second, our body produces two to three million new red blood cells from erythroid progenitors. This mathematical model helps us to understand how the critical cellular decisions between life (proliferation/differentiation) and death are made by these cells through a process involving the JAK2/STAT5 signalling pathway.

Model(s) associated with this Model of the Month: BIOMD0000001077.

Last updated by: Lorenz Adlung


Find us on Twitter

Recently published

How to cite BioModels

Rahuman S Malik-Sheriff, Mihai Glont, Tung V N Nguyen, Krishna Tiwari, Matthew G Roberts, Ashley Xavier, Manh T Vu, Jinghao Men, Matthieu Maire, Sarubini Kananathan, Emma L Fairbanks, Johannes P Meyer, Chinmay Arankalle, Thawfeek M Varusai, Vincent Knight-Schrijver, Lu Li, Corina Dueñas-Roca, Gaurhari Dass, Sarah M Keating, Young M Park, Nicola Buso, Nicolas Rodriguez, Michael Hucka, and Henning Hermjakob
Nucl. Acids Res. 2020
Mihai Glont, Tung V N Nguyen, Martin Graesslin, Robert Hälke, Raza Ali, Jochen Schramm, Sarala M Wimalaratne, Varun B Kothamachu, Nicolas Rodriguez, Maciej J Swat, Jurgen Eils, Roland Eils, Camille Laibe, Rahuman S Malik-Sheriff, Vijayalakshmi Chelliah, Nicolas Le Novère, and Henning Hermjakob
Nucl. Acids Res. 2018
Read more...